Package: baytrends 2.0.12
baytrends: Long Term Water Quality Trend Analysis
Enable users to evaluate long-term trends using a Generalized Additive Modeling (GAM) approach. The model development includes selecting a GAM structure to describe nonlinear seasonally-varying changes over time, incorporation of hydrologic variability via either a river flow or salinity, the use of an intervention to deal with method or laboratory changes suspected to impact data values, and representation of left- and interval-censored data. The approach has been applied to water quality data in the Chesapeake Bay, a major estuary on the east coast of the United States to provide insights to a range of management- and research-focused questions. Methodology described in Murphy (2019) <doi:10.1016/j.envsoft.2019.03.027>.
Authors:
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baytrends.pdf |baytrends.html✨
baytrends/json (API)
NEWS
# Install 'baytrends' in R: |
install.packages('baytrends', repos = c('https://tetratech.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/tetratech/baytrends/issues
- dataCensored - Chesapeake Bay Program Monitoring Data, 1985-2016
- layerLukup - Layer List
- parameterList - Parameter List
- sal - Salinity data
- stationMasterList - Chesapeake Bay Program long-term tidal monitoring stations
- usgsGages - USGS Gages
Last updated 24 days agofrom:fc7ad64f69. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 28 2024 |
R-4.5-win | OK | Oct 28 2024 |
R-4.5-linux | OK | Oct 28 2024 |
R-4.4-win | OK | Oct 28 2024 |
R-4.4-mac | OK | Oct 28 2024 |
R-4.3-win | OK | Oct 28 2024 |
R-4.3-mac | OK | Oct 28 2024 |
Exports:.checkRange.chkParameter.ExpLNmCens.ExpNmCens.F.findFile.fmtPval.gamANOVA.gamCoeff.gamDiffPORtbl.gamPlotCalc.H.H1.H2.H3.H4.H5.initializeResults.mergeFlow.mergeSalinity.P.reAttDF.T.V.vTableanalysisOrganizeDataappendDateFeaturesbaseDaybaseDay2decimalcloseOutcreateResidualsdectimedectime2Datedetrended.flowdetrended.salinityeventLeneventNumeventSeqfillMissingfilterWgtsflwAveragePredgamDiffgamPlotDispgamPlotDispSeasongamTestgamTestSeasongetUSGSflowimputeimputeDFlayerAggregationloadDataloadExcelloadModelsloadModelsResidmakeSurvDFmiss2nana2missnobssaveDFseasAdjflowselectDataunSurvunSurvDF
Dependencies:askpassbitbit64cachemcellrangerclicliprcpp11crayoncurldataRetrievaldigestdplyrevaluatefansifastmapfitdistrplusgenericsgluehighrhmshttrjsonliteknitrlatticelifecyclelubridatemagrittrMASSMatrixmemoisemgcvmimenlmeopensslpanderpillarpkgconfigplyrprettyunitsprogressR6Rcppreadrreadxlrematchrlangsessioninfosurvivalsystibbletidyselecttimechangetzdbutf8vctrsvroomwithrxfunxml2yaml
Flow and Salinity Data Sets
Rendered fromDetrending_Flow_and_Salinity_Data.Rmd
usingknitr::rmarkdown
on Oct 28 2024.Last update: 2020-11-20
Started: 2020-11-12
Processing Censored Water Quality Data
Rendered fromProcessing_Censored_Data.Rmd
usingknitr::rmarkdown
on Oct 28 2024.Last update: 2020-11-18
Started: 2020-11-12